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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_96614496_96674622_R

Intron Information:

Intron Rank:
149277
Intron Class:
major
Intron Phase:
Intron Coordinates:
96614496 - 96674622
Intron Length:
60127

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAAAAAG
5'SS Class:
strong_major
3'SS Sequence:
GCTCTACACCCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AATTTAT
U12 Branch Point Sequence:
TATTGCTTAACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82
0.75
0.9
74
36.4
Major BPS
79.9
0.74
0.9
69.7
37.1
Major PPT
64.4
0.32
1
55
39.5
Minor 5ss
32.2
-2
3
39.4
46.1
Minor BPS
79.1
0.99
1.7
93.36
34.7

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000027809
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000022944
96614015 - 96675144
61130