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Intron Name: Anas_platyrhynchos_platyrhynchos_2_96684445_96684975_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

96684445 - 96684975

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGACACAG

5'SS Class:

weak_major

3'SS Sequence:

ATATGTTCCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

TCCTCCTGTATT

Flanking Amino Acid:

QLSEELKAAEIDE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.2

43.6

39.8

Major BPS

63.3

0.33

1.5

41.2

Major PPT

51.1

0.03

1.7

62.5

43.5

Minor 5ss

33.6

-1.9

3.2

44.4

44.1

Minor BPS

55.5

0.26

1.8

72.38

44.7

Associated Gene:

Gene:

TSHZ1

Ensembl Gene ID:

ENSAPLG00000015100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015729

96681267 - 96684984

3718