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Intron Name: Anas_platyrhynchos_platyrhynchos_2_97164174_97165268_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

97164174 - 97165268

Intron Length:

1095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCCTTTT

5'SS Class:

weak_major

3'SS Sequence:

TCCTTCTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TCCTTCTTAACA

Flanking Amino Acid:

GEHSQNEKISRHNYIEGTKV

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.4

71.1

41.6

Major BPS

0.65

1.1

77.4

37.3

Major PPT

0.68

0.8

76.5

30.8

Minor 5ss

-0.3

2.8

68.2

42.5

Minor BPS

78.5

0.89

1.2

78.35

38.8

Associated Gene:

Gene:

CNDP1

Ensembl Gene ID:

ENSAPLG00000008937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038733

97164068 - 97176581

12514

ENSAPLT00000009296

97164068 - 97178723

14656

ENSAPLT00000004397

97164068 - 97179910

15843