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Intron Name: Anas_platyrhynchos_platyrhynchos_2_97165949_97166115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97165949 - 97166115

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

AAGCATCTAACT

Flanking Amino Acid:

YMDLSVVKQQVEEHLKNVFS

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

73.6

0.53

0.9

67.1

35.4

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

47.2

-0.1

1.8

63.16

40.4

Associated Gene:

Gene:

CNDP1

Ensembl Gene ID:

ENSAPLG00000008937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004397

97164068 - 97179910

15843

ENSAPLT00000038733

97164068 - 97176581

12514

ENSAPLT00000009296

97164068 - 97178723

14656