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Intron Name: Anas_platyrhynchos_platyrhynchos_2_97166281_97167862_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97166281 - 97167862

Intron Length:

1582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCTAT

U12 Branch Point Sequence:

TTTTTTTTGAAG

Flanking Amino Acid:

GVKKFLYSSKEEILLHLWCY

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

61.5

0.29

1.3

62.1

44.1

Major PPT

87.5

0.84

0.9

90.6

22.1

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

64.4

0.31

1.5

70.73

36.5

Associated Gene:

Gene:

CNDP1

Ensembl Gene ID:

ENSAPLG00000008937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004397

97164068 - 97179910

15843

ENSAPLT00000038733

97164068 - 97176581

12514

ENSAPLT00000009296

97164068 - 97178723

14656