Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_97173453_97174491_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97173453 - 97174491

Intron Length:

1039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCTGTC

5'SS Class:

major

3'SS Sequence:

TATTACTTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCTTTTTTAATA

Flanking Amino Acid:

VNSVNLGSHQLPDGQHLPLP

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.2

66.8

39.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.4

0.66

0.8

73.5

36.4

Minor 5ss

36.3

-1.6

3.5

52.1

45.1

Minor BPS

70.1

0.63

1.1

70.9

Associated Gene:

Gene:

CNDP1

Ensembl Gene ID:

ENSAPLG00000008937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009296

97164068 - 97178723

14656

ENSAPLT00000004397

97164068 - 97179910

15843

ENSAPLT00000038733

97164068 - 97176581

12514