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Intron Name: Anas_platyrhynchos_platyrhynchos_2_97340593_97342419_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
97340593 - 97342419

Intron Length:
1827

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTATG

5'SS Class:
strong_major

3'SS Sequence:
TCTTGTTTTCCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTCTAAC

U12 Branch Point Sequence:
TCTAACAGAATT

Flanking Amino Acid:
MCIESMPSEMLMKI

Intron Amino Acid Position:
5

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.2
1.02
0.7
86.9
30.1

Major BPS
66.8
0.42
1.2
69.6
35.5

Major PPT
88
0.85
0.8
80.2
37.3

Minor 5ss
33.9
-1.8
2.8
41.5
45.1

Minor BPS
46.9
-0.1
1.9
67.92
42.5

Associated Gene:

Gene:
FBXO15

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

97340579 - 97364355
23777

97338479 - 97364355
25877