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Intron Name: Anas_platyrhynchos_platyrhynchos_2_97346537_97348362_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
97346537 - 97348362

Intron Length:
1826

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGTTTT

5'SS Class:
strong_major

3'SS Sequence:
GTTCTTTTCAAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGCTAT

U12 Branch Point Sequence:
TTCTTTTCAAAG

Flanking Amino Acid:
LDQSKAPSKNGPRRRSLIAE

Intron Amino Acid Position:
191

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.2
0.83
0.9
83.9
30.3

Major BPS
58.7
0.22
1.5
58.5
47.9

Major PPT
72.8
0.51
1
74
34.5

Minor 5ss
40.2
-1.1
3
49.9
46.4

Minor BPS
52.3
-0
1.7
60.04
42.2

Associated Gene:

Gene:
FBXO15

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

97340579 - 97364355
23777

97338479 - 97364355
25877