About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_97350832_97351764_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
97350832 - 97351764

Intron Length:
933

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGT|GTAAGTTGT

5'SS Class:
major

3'SS Sequence:
TTTTTACTTAAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
TTTTACTTAAAG

Flanking Amino Acid:
LERSTLGSATVQYALPSNKP

Intron Amino Acid Position:
262

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1.1
71.7
40.8

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
79
0.65
1
79.7
31.6

Minor 5ss
43.9
-0.7
2.9
59.1
45.4

Minor BPS
71.8
0.55
1.7
78.16
38.1

Associated Gene:

Gene:
FBXO15

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

97340579 - 97364355
23777

97338479 - 97364355
25877