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Intron Name: Anas_platyrhynchos_platyrhynchos_2_97360385_97363759_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
97360385 - 97363759

Intron Length:
3375

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGTCAG

5'SS Class:
major

3'SS Sequence:
GTTTGTGTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATAAT

U12 Branch Point Sequence:
AGGAAAATAATC

Flanking Amino Acid:
ETDAFKGNVKDCYVMDVTLL

Intron Amino Acid Position:
353

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1.3
68.8
43.8

Major BPS
71.2
0.53
1
70.3
31.9

Major PPT
76.2
0.59
0.9
73.5
41.9

Minor 5ss
29
-2.4
2.6
32.3
42.2

Minor BPS
40.5
-0.7
1.8
46.04
35.5

Associated Gene:

Gene:
FBXO15

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

97340579 - 97364355
23777

97338479 - 97364355
25877