Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_97635522_97643112_F

Intron Information:

Intron Rank:

142446

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

97635522 - 97643112

Intron Length:

7591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAGG

5'SS Class:

major

3'SS Sequence:

CATGCTGAGACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TTTTCTTGCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

59.9

44.8

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

55.2

0.12

1.1

49.7

42.8

Minor 5ss

31.2

-2.2

3.2

40.5

45.3

Minor BPS

62.9

0.4

1.9

80.01

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033607

97634435 - 97643692

9258