Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_97635522_97683951_F

Intron Information:

Intron Rank:

142449

Intron Class:

major

Intron Phase:

Intron Coordinates:

97635522 - 97683951

Intron Length:

48430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAGG

5'SS Class:

major

3'SS Sequence:

TTTGCACCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

ATGTTCTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

59.9

44.8

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

74.5

0.55

0.9

70.9

34.9

Minor 5ss

31.2

-2.2

3.2

40.5

45.3

Minor BPS

73.5

0.74

1.1

75.95

35.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045455

97628420 - 97685788

57369