Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_97914323_97926375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97914323 - 97926375

Intron Length:

12053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGACCT

5'SS Class:

major

3'SS Sequence:

TCTTTGTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TACTATTTAATA

Flanking Amino Acid:

FQMLFTSFQEPPCEANTFFC

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.3

41.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

85.6

0.8

0.7

84.6

30.4

Minor 5ss

-1.6

3.2

49.2

39.8

Minor BPS

64.2

0.44

1.4

69.14

37.5

Associated Gene:

Gene:

NETO1

Ensembl Gene ID:

ENSAPLG00000009839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010239

97863676 - 97936672

72997

ENSAPLT00000010236

97863676 - 97932842

69167