Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_97972425_97973125_F

Intron Information:

Intron Rank:

133908

Intron Class:

major

Intron Phase:

Intron Coordinates:

97972425 - 97973125

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTTAT

5'SS Class:

major

3'SS Sequence:

TTACTGAATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TATGCCTTTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

74.9

38.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

64.4

0.32

56.2

43.5

Minor 5ss

-1.1

3.2

48.8

47.3

Minor BPS

70.1

0.71

1.7

85.25

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040540

97972296 - 97974117

1822