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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_97973523_97973836_F

Intron Information:

Intron Rank:
133907
Intron Class:
major
Intron Phase:
Intron Coordinates:
97973523 - 97973836
Intron Length:
314

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGTAGTGA
5'SS Class:
major
3'SS Sequence:
TCTTTGTCTTTAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
CATTCAT
U12 Branch Point Sequence:
TTACACAAAACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
67.4
0.41
1
57.7
37.5
Major BPS
79.8
0.74
0.9
81.3
29.9
Major PPT
82.6
0.73
0.8
81.3
30.8
Minor 5ss
36.1
-1.6
3.3
46.6
48.7
Minor BPS
47.8
-0
2.1
72.87
43

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000021982
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000040540
97972296 - 97974117
1822
ENSAPLT00000032457
97972296 - 97974117
1822