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Intron Name: Anas_platyrhynchos_platyrhynchos_2_9810444_9815107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9810444 - 9815107

Intron Length:

4664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTACCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTGTTTTTACTC

Flanking Amino Acid:

MSVRHIKKEEGRRFLSFLFS

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

68.4

0.41

0.9

62.5

32.2

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

60.2

0.3

1.6

68.78

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029622

9805260 - 9822039

16780