Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_9853933_9855279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9853933 - 9855279

Intron Length:

1347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

EDPDKDDFLGSLMIDLIEVE

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

87.7

26.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

85.9

0.81

0.6

80.5

31.5

Minor 5ss

-1.4

3.5

57.8

46.8

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

ESYT2

Ensembl Gene ID:

ENSAPLG00000014371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039424

9833780 - 9912282

78503

ENSAPLT00000029157

9835185 - 9912282

77098

ENSAPLT00000015032

9833780 - 9912282

78503