Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_9883460_9884600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9883460 - 9884600

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CCAACTTTAATT

Flanking Amino Acid:

SFTKIDIGHQPLRINGVKVY

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

1.2

82.3

32.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

89.3

0.88

0.7

88.1

28.9

Minor 5ss

40.2

-1.1

2.8

44.1

Minor BPS

62.9

0.48

1.3

68.88

42.7

Associated Gene:

Gene:

ESYT2

Ensembl Gene ID:

ENSAPLG00000014371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029157

9835185 - 9912282

77098

ENSAPLT00000015032

9833780 - 9912282

78503

ENSAPLT00000039424

9833780 - 9912282

78503