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Intron Name: Anas_platyrhynchos_platyrhynchos_2_99161860_99163346_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99161860 - 99163346

Intron Length:

1487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAACT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTACTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTATTTTTACT

Flanking Amino Acid:

AYRCCLEVVKDCLGVHNIAK

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

79.3

33.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.7

0.51

1.1

73.6

35.3

Minor 5ss

32.5

-2

2.8

42.4

43.9

Minor BPS

0.55

1.6

84.12

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009263

99137782 - 99163529

25748