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Intron Name: Anas_platyrhynchos_platyrhynchos_2_9918832_9920899_F

Intron Information:

Intron Rank:

145462

Intron Class:

major

Intron Phase:

Intron Coordinates:

9918832 - 9920899

Intron Length:

2068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

AATTGATTACTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

0.76

0.8

77.4

36.9

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

-0.5

2.2

51.94

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021876

9918817 - 9924275

5459