Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_99424300_99521609_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99424300 - 99521609

Intron Length:

97310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

ATATTGTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

AATCCATTGATA

Flanking Amino Acid:

YVKIRSRKLGIFRRCWLVFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

0.72

78.4

31.2

Major PPT

78.9

0.65

69.9

45.1

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

55.1

0.15

1.6

64.5

34.9

Associated Gene:

Gene:

DOK6

Ensembl Gene ID:

ENSAPLG00000008778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009126

99281243 - 99522016

240774