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Intron Name: Anas_platyrhynchos_platyrhynchos_2_99779059_99800718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

99779059 - 99800718

Intron Length:

21660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

AAAATATTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

75.9

0.64

66.1

40.5

Major PPT

85.6

0.8

0.7

85.1

29.7

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

46.9

-0.1

1.8

62.57

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019203

99703327 - 99800749

97423

ENSAPLT00000047942

99751432 - 99800749

49318

ENSAPLT00000029848

99640942 - 99800749

159808

ENSAPLT00000024827

99751695 - 99800749

49055