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Intron Name: Anas_platyrhynchos_platyrhynchos_2_99850322_99850751_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
99850322 - 99850751

Intron Length:
430

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGTTT

5'SS Class:
major

3'SS Sequence:
GCATGTATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTAAT

U12 Branch Point Sequence:
TTGGCATTAATG

Flanking Amino Acid:
NFWKTLNWLEGIASEFGVRG

Intron Amino Acid Position:
82

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.9
0.54
1.1
72.5
39.4

Major BPS
79.4
0.73
0.9
79.6
29.1

Major PPT
70.8
0.47
1
66.2
43.9

Minor 5ss
41.7
-0.9
3.6
64.7
46.6

Minor BPS
58.4
0.13
1.8
64.19
44.1

Associated Gene:

Gene:
TMX3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

99850014 - 99867347
17334