Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_99865462_99866502_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99865462 - 99866502

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTCCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTTTTTGACT

Flanking Amino Acid:

IIYDAKSTVVSVFKSSPLLG

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

71.9

0.49

66.7

39.5

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

1.09

0.9

94.3

25.7

Associated Gene:

Gene:

TMX3

Ensembl Gene ID:

ENSAPLG00000010231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039804

99850014 - 99867347

17334

ENSAPLT00000010711

99842986 - 99867347

24362