Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_100074305_100076765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

100074305 - 100076765

Intron Length:

2461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAACTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAACT

Flanking Amino Acid:

QTEIALLLQRKQELIAELDQ

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

80.6

0.69

0.8

75.9

32.8

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

88.9

1.3

0.8

99.22

Associated Gene:

Gene:

MAP3K7

Ensembl Gene ID:

ENSAPLG00000002702

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045540

100072539 - 100121841

49303

ENSAPLT00000037233

100072539 - 100121841

49303

ENSAPLT00000002739

100072539 - 100121841

49303