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Intron Name: Anas_platyrhynchos_platyrhynchos_3_100097578_100098749_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
100097578 - 100098749

Intron Length:
1172

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAGTTG

5'SS Class:
major

3'SS Sequence:
TGCTCATTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTGACTTTATT

Flanking Amino Acid:
EGQSNSATSTGSFMDITSTN

Intron Amino Acid Position:
308

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.3
0.5
1.1
63.9
42.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
74.6
0.55
0.9
66.2
39.8

Minor 5ss
38.6
-1.3
3.6
55.1
49.1

Minor BPS
58.1
0.33
1.9
80.89
40.9

Associated Gene:

Gene:
MAP3K7

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

100072539 - 100121841
49303

100072539 - 100121841
49303

100072539 - 100121841
49303