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Intron Name: Anas_platyrhynchos_platyrhynchos_3_100346010_100420458_F

Intron Information:

Intron Rank:

131703

Intron Class:

major

Intron Phase:

Intron Coordinates:

100346010 - 100420458

Intron Length:

74449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TTGGTCTAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

72.4

38.6

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

78.5

0.64

0.9

76.8

37.4

Minor 5ss

41.3

-1

2.5

48.1

42.7

Minor BPS

49.8

-0

1.9

63.53

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020695

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026537

100345221 - 100482085

136865