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Intron Name: Anas_platyrhynchos_platyrhynchos_3_100379601_100420458_F

Intron Information:

Intron Rank:

131705

Intron Class:

major

Intron Phase:

Intron Coordinates:

100379601 - 100420458

Intron Length:

40858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TTGGTCTAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

78.5

0.64

0.9

76.8

37.4

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

49.8

-0

1.9

63.53

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020695

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040962

100379506 - 100420481

40976