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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10110282_10164605_R

Intron Information:

Intron Rank:

152283

Intron Class:

major

Intron Phase:

Intron Coordinates:

10110282 - 10164605

Intron Length:

54324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGGTATTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTTTGGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

79.1

0.65

72.4

42.2

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

44.5

-0.3

2.7

74.56

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021161

10110079 - 10164725

54647