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Intron Name: Anas_platyrhynchos_platyrhynchos_3_101501390_101504844_F

Intron Information:

Intron Rank:

133490

Intron Class:

major

Intron Phase:

Intron Coordinates:

101501390 - 101504844

Intron Length:

3455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

ATAGACTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

72.5

0.56

1.1

63.4

Major PPT

85.8

0.81

0.8

80.7

31.4

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

52.8

0.17

1.9

72.43

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024620

101489118 - 101504955

15838