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Intron Name: Anas_platyrhynchos_platyrhynchos_3_102303553_102304238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102303553 - 102304238

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTATTTTAATG

Flanking Amino Acid:

MYHNVKYIIDKYGAHPAFYR

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.7

30.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.8

76.3

32.4

Minor 5ss

31.6

-2.1

3.2

41.8

38.8

Minor BPS

62.3

0.25

1.4

62.86

40.1

Associated Gene:

Gene:

MANEA

Ensembl Gene ID:

ENSAPLG00000005108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043662

102203109 - 102305607

102499

ENSAPLT00000027740

102156004 - 102305607

149604

ENSAPLT00000005276

102203109 - 102318712

115604