Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_10236927_10238159_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10236927 - 10238159

Intron Length:

1233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATAGAA

5'SS Class:

major

3'SS Sequence:

CGCGCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAC

U12 Branch Point Sequence:

TGCTCCTCTCTT

Flanking Amino Acid:

IHGERQKDKLVVLECFVKKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

65.9

33.1

Major BPS

54.8

0.12

1.1

46.8

37.9

Major PPT

64.2

0.32

0.9

53.4

36.6

Minor 5ss

-2.3

3.3

35.1

43.3

Minor BPS

37.8

-0.8

3.6

64.75

45.7

Associated Gene:

Gene:

SPRED2

Ensembl Gene ID:

ENSAPLG00000009387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032972

10210036 - 10259835

49800

ENSAPLT00000022119

10204590 - 10259835

55246

ENSAPLT00000009778

10228600 - 10259835

31236