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Intron Name: Anas_platyrhynchos_platyrhynchos_3_102670156_102670574_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
102670156 - 102670574

Intron Length:
419

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACCTTAA

5'SS Class:
major

3'SS Sequence:
TCCTGTTTCTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
CATATTTTAATC

Flanking Amino Acid:
MVKKGDKKKERQVLFQHRQA

Intron Amino Acid Position:
662

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.8
0.56
1.2
71.3
37.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
77.1
0.61
0.8
76.1
32.5

Minor 5ss
44
-0.7
2.9
58.2
46.4

Minor BPS
61
0.32
1.3
63.25
36.7

Associated Gene:

Gene:
UFL1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

102650979 - 102672767
21789