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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1028324_1030521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1028324 - 1030521

Intron Length:

2198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTGTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TCATTCATACTT

Flanking Amino Acid:

AAGGYIAGKKDLVDFLRTHS

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

33.5

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

61.2

0.25

1.2

67.4

42.8

Minor 5ss

27.9

-2.5

3.5

37.1

47.5

Minor BPS

49.4

0.03

1.9

68.84

42.5

Associated Gene:

Gene:

SPTLC3

Ensembl Gene ID:

ENSAPLG00000011146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048085

964035 - 1047987

83953

ENSAPLT00000021081

964035 - 1045732

81698

ENSAPLT00000011600

954416 - 1047987

93572