Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102869404 - 102889167

Intron Length:

19764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATT

Flanking Amino Acid:

VLAACSDYFRAMFSLCMVES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

65.3

40.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.81

0.6

80.7

31.3

Minor 5ss

35.8

-1.6

2.8

39.3

39.7

Minor BPS

0.99

87.98

30.9

Associated Gene:

Gene:

KLHL32

Ensembl Gene ID:

ENSAPLG00000005979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022766

102868560 - 102959245

90686

ENSAPLT00000043823

102866323 - 102890943

24621

ENSAPLT00000018667

102866323 - 102903253

36931

ENSAPLT00000040003

102846338 - 102921230

74893

ENSAPLT00000046749

102837871 - 102958644

120774

ENSAPLT00000006211

102846042 - 102958644

112603

ENSAPLT00000037612

102837871 - 102959245

121375

ENSAPLT00000046261

102837871 - 102958644

120774

ENSAPLT00000023612

102866323 - 102958644

92322

ENSAPLT00000044793

102837871 - 102958644

120774

Intron Name: Anas_platyrhynchos_platyrhynchos_3_102869404_102889167_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: