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Intron Name: Anas_platyrhynchos_platyrhynchos_3_102899451_102922214_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
102899451 - 102922214

Intron Length:
22764

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGGCTT

5'SS Class:
strong_major

3'SS Sequence:
TTCACCCATTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAG

U12 Branch Point Sequence:
TTTTTCTGAGAT

Flanking Amino Acid:
LSLCSHYLIQELNSFNYLDL

Intron Amino Acid Position:
138

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.6
0.86
0.9
78.6
37.3

Major BPS
67.4
0.43
1.5
65.3
43.7

Major PPT
69.4
0.44
0.9
67
34.3

Minor 5ss
31.2
-2.1
3.5
46.7
48.6

Minor BPS
59.1
0.36
1.8
82.14
38.8

Associated Gene:

Gene:
KLHL32

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

102837871 - 102959245
121375

102868560 - 102959245
90686

102846042 - 102958644
112603

102837871 - 102958644
120774

102837871 - 102958644
120774