Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_103049295_103050360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103049295 - 103050360

Intron Length:

1066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGATAGC

5'SS Class:

major

3'SS Sequence:

TTTTTAATCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATC

Flanking Amino Acid:

AAFTVQHQAKIFPPSWHLLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.2

61.6

43.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.1

0.74

0.8

77.8

34.2

Minor 5ss

30.4

-2.2

2.8

37.5

39.9

Minor BPS

75.9

0.79

78.34

30.9

Associated Gene:

Gene:

MMS22L

Ensembl Gene ID:

ENSAPLG00000006108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006336

102973373 - 103062614

89242