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Intron Name: Anas_platyrhynchos_platyrhynchos_3_103060229_103062421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

103060229 - 103062421

Intron Length:

2193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

AGTTTATTACTA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

74.8

0.62

1.1

40.5

Major PPT

82.4

0.73

0.9

37.4

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

49.6

-0

1.8

63.16

37.2

Associated Gene:

Gene:

MMS22L

Ensembl Gene ID:

ENSAPLG00000006108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006336

102973373 - 103062614

89242