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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1030649_1044266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1030649 - 1044266

Intron Length:

13618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

TGACACATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTGCACTGACT

Flanking Amino Acid:

CLMGLDGTTQGLQRVRQLGK

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

72.3

39.5

Major BPS

84.6

0.86

41.2

Major PPT

68.3

0.41

63.2

42.4

Minor 5ss

38.2

-1.3

3.1

50.1

46.5

Minor BPS

53.7

0.2

2.1

81.53

39.9

Associated Gene:

Gene:

SPTLC3

Ensembl Gene ID:

ENSAPLG00000011146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011600

954416 - 1047987

93572

ENSAPLT00000048085

964035 - 1047987

83953

ENSAPLT00000021081

964035 - 1045732

81698