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Intron Name: Anas_platyrhynchos_platyrhynchos_3_103066040_103106989_F

Intron Information:

Intron Rank:

139956

Intron Class:

major

Intron Phase:

Intron Coordinates:

103066040 - 103106989

Intron Length:

40950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTAATATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.7

0.71

0.9

78.4

39.4

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

75.4

0.79

1.1

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030864

103065322 - 103221211

155890

ENSAPLT00000030686

103065322 - 103130203

64882

ENSAPLT00000027661

103065322 - 103138233

72912

ENSAPLT00000047351

103065322 - 103130717

65396