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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10341211_10341666_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10341211 - 10341666

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGGTAA

5'SS Class:

major

3'SS Sequence:

TTTCTCCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTGTCACTAAGT

Flanking Amino Acid:

VCSVGSCCKLSDYLFKLLLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

38.6

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.83

0.7

81.7

23.1

Minor 5ss

-2.2

3.3

37.9

47.1

Minor BPS

0.11

2.2

77.96

Associated Gene:

Gene:

RAB1A

Ensembl Gene ID:

ENSAPLG00000018342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038975

10341131 - 10347713

6583