Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_103439889_103442010_R

Intron Information:

Intron Rank:

140453

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

103439889 - 103442010

Intron Length:

2122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

GTCCTTGGTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

57.6

0.17

1.2

55.4

43.9

Minor 5ss

41.2

-1

3.4

64.1

41.5

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021560

103438399 - 103442332

3934