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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10345481_10346514_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10345481 - 10346514

Intron Length:

1034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTGCTCACAGCT

Flanking Amino Acid:

IIVVYDVTDQESFNNVKQWL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

76.7

0.6

0.8

69.5

36.8

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

44.9

-0.3

66.62

43.7

Associated Gene:

Gene:

RAB1A

Ensembl Gene ID:

ENSAPLG00000018342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038975

10341131 - 10347713

6583

ENSAPLT00000022112

10336320 - 10347713

11394