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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10346647_10346906_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10346647 - 10346906

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCGCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TGTGAGCTCACT

Flanking Amino Acid:

KKVVDYTTAKEFADSLGIPF

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

0.28

1.1

63.1

35.8

Major PPT

0.63

0.8

72.3

32.3

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

37.8

-0.8

2.7

62.19

47.2

Associated Gene:

Gene:

RAB1A

Ensembl Gene ID:

ENSAPLG00000018342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038975

10341131 - 10347713

6583

ENSAPLT00000022112

10336320 - 10347713

11394