Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_10350529_10351548_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10350529 - 10351548

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCAGG

5'SS Class:

major

3'SS Sequence:

TGCTTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TTCTGCTTCATT

Flanking Amino Acid:

DSTRQAAAQWVLPPSGLGFV

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.6

48.1

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

80.8

0.69

0.9

77.8

35.2

Minor 5ss

38.3

-1.3

2.8

40.5

45.4

Minor BPS

56.4

0.28

2.2

79.08

43.9

Associated Gene:

Gene:

CEP68

Ensembl Gene ID:

ENSAPLG00000016942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047787

10350237 - 10356916

6680