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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10352605_10352990_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10352605 - 10352990

Intron Length:
386

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAGGTCTC

5'SS Class:
major

3'SS Sequence:
CCTCTCCTCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAAACAC

U12 Branch Point Sequence:
CTCTCCTCTCCT

Flanking Amino Acid:
SVKAALRRYLEFRRDVADHR

Intron Amino Acid Position:
641

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
1
68.8
42.2

Major BPS
46.4
-0.2
1
50.7
32.2

Major PPT
73
0.52
0.7
65.2
30.5

Minor 5ss
37.5
-1.4
3.3
49.5
41.3

Minor BPS
39.3
-0.7
3.6
68.05
48.4

Associated Gene:

Gene:
CEP68

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10350395 - 10356916
6522

10350237 - 10356916
6680