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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104109762_104111601_F

Intron Information:

Intron Rank:

142321

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

104109762 - 104111601

Intron Length:

1840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GCATATTCCAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGATGCTTAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

0.85

0.9

39.9

Major PPT

56.6

0.15

1.1

55.6

38.8

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

59.1

0.36

2.1

77.58

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025770

104108994 - 104112754

3761