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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104183604_104184917_F

Intron Information:

Intron Rank:

143553

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

104183604 - 104184917

Intron Length:

1314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAACC

5'SS Class:

major

3'SS Sequence:

AAACGGATGAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TTTTCCAAAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

68.6

36.5

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

44.6

-0.3

1.2

34.1

38.9

Minor 5ss

27.9

-2.5

34.8

41.3

Minor BPS

57.4

0.21

76.86

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020344

104183288 - 104196223

12936