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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104193368_104195962_F

Intron Information:

Intron Rank:

143555

Intron Class:

major

Intron Phase:

Intron Coordinates:

104193368 - 104195962

Intron Length:

2595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TTTTCCTCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.8

34.5

Major BPS

73.1

0.58

73.8

32.3

Major PPT

75.4

0.57

0.8

73.5

36.3

Minor 5ss

34.2

-1.8

2.8

41.8

Minor BPS

77.1

0.93

1.6

94.15

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020344

104183288 - 104196223

12936