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Intron Name: Anas_platyrhynchos_platyrhynchos_3_104520081_104530881_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104520081 - 104530881

Intron Length:

10801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCATTCTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCATTTTTAATT

Flanking Amino Acid:

ALEQITTVAKVDDSNCDAEL

Intron Amino Acid Position:

2168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.5

33.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.9

0.61

0.8

73.1

31.4

Minor 5ss

36.8

-1.5

3.3

48.1

47.6

Minor BPS

72.8

0.79

1.1

79.64

37.1

Associated Gene:

Gene:

NBAS

Ensembl Gene ID:

ENSAPLG00000012361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012954

104519805 - 104691929

172125